Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Genes Targeted by hsa-mir-548l in IDC Breast Radvanyi Cluster 51 Table contains all genes in the IDC Breast Radvanyi cluster number 51. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-548l 151636 DTX3L deltex 3-like (Drosophila) [Source:HGNC Symbol;Acc:30323] T 92667 C20orf72 chromosome 20 open reading frame 72 [Source:HGNC Symbol;Acc:16205] zzz999 285237 C3orf38 chromosome 3 open reading frame 38 [Source:HGNC Symbol;Acc:28384] zzz999 26354 GNL3 guanine nucleotide binding protein-like 3 (nucleolar) [Source:HGNC Symbol;Acc:29931] zzz999 7531 YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide [Source:HGNC Symbol;Acc:12851] T 55527 FEM1A fem-1 homolog a (C. elegans) [Source:HGNC Symbol;Acc:16934] zzz999 8668 EIF3I eukaryotic translation initiation factor 3, subunit I [Source:HGNC Symbol;Acc:3272] zzz999 23376 KIAA0776 KIAA0776 [Source:HGNC Symbol;Acc:23039] T 255520 ELMOD2 ELMO/CED-12 domain containing 2 [Source:HGNC Symbol;Acc:28111] zzz999 11235 PDCD10 programmed cell death 10 [Source:HGNC Symbol;Acc:8761] zzz999 5910 RAP1GDS1 RAP1, GTP-GDP dissociation stimulator 1 [Source:HGNC Symbol;Acc:9859] zzz999 127829 ARL8A ADP-ribosylation factor-like 8A [Source:HGNC Symbol;Acc:25192] zzz999 64769 MEAF6 MYST/Esa1-associated factor 6 [Source:HGNC Symbol;Acc:25674] P T 359948 IRF2BP2 interferon regulatory factor 2 binding protein 2 [Source:HGNC Symbol;Acc:21729] P T 5529 PPP2R5E protein phosphatase 2, regulatory subunit B', epsilon isoform [Source:HGNC Symbol;Acc:9313] zzz999 136319 MTPN myotrophin [Source:HGNC Symbol;Acc:15667] P T 51250 C6orf203 chromosome 6 open reading frame 203 [Source:HGNC Symbol;Acc:17971] zzz999 3099 HK2 hexokinase 2 [Source:HGNC Symbol;Acc:4923] zzz999 55588 MED29 mediator complex subunit 29 [Source:HGNC Symbol;Acc:23074] T 27075 TSPAN13 tetraspanin 13 [Source:HGNC Symbol;Acc:21643] zzz999 79594 MUL1 mitochondrial E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:25762] zzz999 10776 ARPP19 cAMP-regulated phosphoprotein, 19kDa [Source:HGNC Symbol;Acc:16967] T 400 ARL1 ADP-ribosylation factor-like 1 [Source:HGNC Symbol;Acc:692] T 59274 MESDC1 mesoderm development candidate 1 [Source:HGNC Symbol;Acc:13519] zzz999 163859 C1orf55 chromosome 1 open reading frame 55 [Source:HGNC Symbol;Acc:26643] T 2872 MKNK2 MAP kinase interacting serine/threonine kinase 2 [Source:HGNC Symbol;Acc:7111] zzz999 221294 NT5DC1 5'-nucleotidase domain containing 1 [Source:HGNC Symbol;Acc:21556] zzz999 55216 C11orf57 chromosome 11 open reading frame 57 [Source:HGNC Symbol;Acc:25569] T 84078 KBTBD7 kelch repeat and BTB (POZ) domain containing 7 [Source:HGNC Symbol;Acc:25266] zzz999 47 ACLY ATP citrate lyase [Source:HGNC Symbol;Acc:115] zzz999 51441 YTHDF2 YTH domain family, member 2 [Source:HGNC Symbol;Acc:31675] zzz999 10762 NUP50 nucleoporin 50kDa [Source:HGNC Symbol;Acc:8065] T 7011 TEP1 telomerase-associated protein 1 [Source:HGNC Symbol;Acc:11726] zzz999 6813 STXBP2 syntaxin binding protein 2 [Source:HGNC Symbol;Acc:11445] zzz999 5898 RALA v-ral simian leukemia viral oncogene homolog A (ras related) [Source:HGNC Symbol;Acc:9839] T 605 BCL7A B-cell CLL/lymphoma 7A [Source:HGNC Symbol;Acc:1004] zzz999 84641 HIATL1 hippocampus abundant transcript-like 1 [Source:HGNC Symbol;Acc:23376] zzz999 25896 INTS7 integrator complex subunit 7 [Source:HGNC Symbol;Acc:24484] zzz999 10802 SEC24A SEC24 family, member A (S. cerevisiae) [Source:HGNC Symbol;Acc:10703] T 648 BMI1 BMI1 polycomb ring finger oncogene [Source:HGNC Symbol;Acc:1066] T 10487 CAP1 CAP, adenylate cyclase-associated protein 1 (yeast) [Source:HGNC Symbol;Acc:20040] zzz999 6815 STYX serine/threonine/tyrosine interacting protein [Source:HGNC Symbol;Acc:11447] T 5422 POLA1 polymerase (DNA directed), alpha 1, catalytic subunit [Source:HGNC Symbol;Acc:9173] zzz999 8697 CDC23 cell division cycle 23 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:1724] zzz999 65977 PLEKHA3 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3 [Source:HGNC Symbol;Acc:14338] P T 1968 EIF2S3 eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa [Source:HGNC Symbol;Acc:3267] zzz999 57621 ZBTB2 zinc finger and BTB domain containing 2 [Source:HGNC Symbol;Acc:20868] T 9585 KIF20B kinesin family member 20B [Source:HGNC Symbol;Acc:7212] T 1182 CLCN3 chloride channel 3 [Source:HGNC Symbol;Acc:2021] zzz999 5901 RAN RAN, member RAS oncogene family [Source:HGNC Symbol;Acc:9846] zzz999 84910 TMEM87B transmembrane protein 87B [Source:HGNC Symbol;Acc:25913] zzz999 85476 GFM1 G elongation factor, mitochondrial 1 [Source:HGNC Symbol;Acc:13780] T 11018 TMED1 transmembrane emp24 protein transport domain containing 1 [Source:HGNC Symbol;Acc:17291] zzz999 55605 KIF21A kinesin family member 21A [Source:HGNC Symbol;Acc:19349] zzz999 8178 ELL elongation factor RNA polymerase II [Source:HGNC Symbol;Acc:23114] zzz999 5955 RCN2 reticulocalbin 2, EF-hand calcium binding domain [Source:HGNC Symbol;Acc:9935] zzz999 8934 RAB7L1 RAB7, member RAS oncogene family-like 1 [Source:HGNC Symbol;Acc:9789] zzz999 55330 CNO cappuccino homolog (mouse) [Source:HGNC Symbol;Acc:24206] zzz999 22856 CHSY1 chondroitin sulfate synthase 1 [Source:HGNC Symbol;Acc:17198] zzz999 56674 TMEM9B TMEM9 domain family, member B [Source:HGNC Symbol;Acc:1168] zzz999 153642 ARSK arylsulfatase family, member K [Source:HGNC Symbol;Acc:25239] zzz999 2671 GFER growth factor, augmenter of liver regeneration [Source:HGNC Symbol;Acc:4236] zzz999 8027 STAM signal transducing adaptor molecule (SH3 domain and ITAM motif) 1 [Source:HGNC Symbol;Acc:11357] zzz999 4976 OPA1 optic atrophy 1 (autosomal dominant) [Source:HGNC Symbol;Acc:8140] zzz999 92799 SHKBP1 SH3KBP1 binding protein 1 [Source:HGNC Symbol;Acc:19214] zzz999 10210 TOPORS topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:21653] T 10525 HYOU1 hypoxia up-regulated 1 [Source:HGNC Symbol;Acc:16931] zzz999 4707 NDUFB1 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 1, 7kDa [Source:HGNC Symbol;Acc:7695] zzz999 113201 CASC4 cancer susceptibility candidate 4 [Source:HGNC Symbol;Acc:24892] zzz999 54472 TOLLIP toll interacting protein [Source:HGNC Symbol;Acc:16476] zzz999 9898 UBAP2L ubiquitin associated protein 2-like [Source:HGNC Symbol;Acc:29877] zzz999 9874 TLK1 tousled-like kinase 1 [Source:HGNC Symbol;Acc:11841] P T 7251 TSG101 tumor susceptibility gene 101 [Source:HGNC Symbol;Acc:15971] zzz999 2805 GOT1 glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1) [Source:HGNC Symbol;Acc:4432] zzz999 29090 C18orf55 chromosome 18 open reading frame 55 [Source:HGNC Symbol;Acc:25010] T 55172 C14orf104 chromosome 14 open reading frame 104 [Source:HGNC Symbol;Acc:20188] zzz999 59338 PLEKHA1 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1 [Source:HGNC Symbol;Acc:14335] zzz999 3416 IDE insulin-degrading enzyme [Source:HGNC Symbol;Acc:5381] zzz999 51077 FCF1 FCF1 small subunit (SSU) processome component homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:20220] T 94241 TP53INP1 tumor protein p53 inducible nuclear protein 1 [Source:HGNC Symbol;Acc:18022] T 83874 TBC1D10A TBC1 domain family, member 10A [Source:HGNC Symbol;Acc:23609] zzz999 23197 FAF2 Fas associated factor family member 2 [Source:HGNC Symbol;Acc:24666] T 55173 MRPS10 mitochondrial ribosomal protein S10 [Source:HGNC Symbol;Acc:14502] zzz999 10933 MORF4L1 mortality factor 4 like 1 [Source:HGNC Symbol;Acc:16989] zzz999 10285 SMNDC1 survival motor neuron domain containing 1 [Source:HGNC Symbol;Acc:16900] zzz999 51430 C1orf9 chromosome 1 open reading frame 9 [Source:HGNC Symbol;Acc:1240] zzz999 55219 TMEM57 transmembrane protein 57 [Source:HGNC Symbol;Acc:25572] zzz999 7155 TOP2B topoisomerase (DNA) II beta 180kDa [Source:HGNC Symbol;Acc:11990] zzz999 55732 C1orf112 chromosome 1 open reading frame 112 [Source:HGNC Symbol;Acc:25565] zzz999 10166 SLC25A15 solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15 [Source:HGNC Symbol;Acc:10985] zzz999 10100 TSPAN2 tetraspanin 2 [Source:HGNC Symbol;Acc:20659] T 2247 FGF2 fibroblast growth factor 2 (basic) [Source:HGNC Symbol;Acc:3676] zzz999 80267 EDEM3 ER degradation enhancer, mannosidase alpha-like 3 [Source:HGNC Symbol;Acc:16787] P T 28978 TMEM14A transmembrane protein 14A [Source:HGNC Symbol;Acc:21076] zzz999 8505 PARG poly (ADP-ribose) glycohydrolase [Source:HGNC Symbol;Acc:8605] zzz999 147407 MCART2 mitochondrial carrier triple repeat 2 [Source:HGNC Symbol;Acc:23324] zzz999 9967 THRAP3 thyroid hormone receptor associated protein 3 [Source:HGNC Symbol;Acc:22964] zzz999 23545 ATP6V0A2 ATPase, H+ transporting, lysosomal V0 subunit a2 [Source:HGNC Symbol;Acc:18481] T 6574 SLC20A1 solute carrier family 20 (phosphate transporter), member 1 [Source:HGNC Symbol;Acc:10946] zzz999 6738 TROVE2 TROVE domain family, member 2 [Source:HGNC Symbol;Acc:11313] zzz999 546 ATRX alpha thalassemia/mental retardation syndrome X-linked [Source:HGNC Symbol;Acc:886] P T 1977 EIF4E eukaryotic translation initiation factor 4E [Source:HGNC Symbol;Acc:3287] P T 11221 DUSP10 dual specificity phosphatase 10 [Source:HGNC Symbol;Acc:3065] P T 84317 CCDC115 coiled-coil domain containing 115 [Source:HGNC Symbol;Acc:28178] zzz999 5509 PPP1R3D protein phosphatase 1, regulatory (inhibitor) subunit 3D [Source:HGNC Symbol;Acc:9294] P T 23607 CD2AP CD2-associated protein [Source:HGNC Symbol;Acc:14258] T 9050 PSTPIP2 proline-serine-threonine phosphatase interacting protein 2 [Source:HGNC Symbol;Acc:9581] T 10808 HSPH1 heat shock 105kDa/110kDa protein 1 [Source:HGNC Symbol;Acc:16969] zzz999 64853 AIDA axin interactor, dorsalization associated [Source:HGNC Symbol;Acc:25761] zzz999 9663 LPIN2 lipin 2 [Source:HGNC Symbol;Acc:14450] zzz999 9918 NCAPD2 non-SMC condensin I complex, subunit D2 [Source:HGNC Symbol;Acc:24305] zzz999 1486 CTBS chitobiase, di-N-acetyl- [Source:HGNC Symbol;Acc:2496] T 908 CCT6A chaperonin containing TCP1, subunit 6A (zeta 1) [Source:HGNC Symbol;Acc:1620] zzz999 3187 HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) [Source:HGNC Symbol;Acc:5041] zzz999 285193 DUSP28 dual specificity phosphatase 28 [Source:HGNC Symbol;Acc:33237] zzz999 4594 MUT methylmalonyl CoA mutase [Source:HGNC Symbol;Acc:7526] T 1616 DAXX death-domain associated protein [Source:HGNC Symbol;Acc:2681] zzz999 81542 TMX1 thioredoxin-related transmembrane protein 1 [Source:HGNC Symbol;Acc:15487] zzz999 7374 UNG uracil-DNA glycosylase [Source:HGNC Symbol;Acc:12572] zzz999 1105 CHD1 chromodomain helicase DNA binding protein 1 [Source:HGNC Symbol;Acc:1915] zzz999 11320 MGAT4A mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A [Source:HGNC Symbol;Acc:7047] P T 11215 AKAP11 A kinase (PRKA) anchor protein 11 [Source:HGNC Symbol;Acc:369] P T 51241 COX16 COX16 cytochrome c oxidase assembly homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:20213] zzz999 23595 ORC3 origin recognition complex, subunit 3 [Source:HGNC Symbol;Acc:8489] T 25994 HIGD1A HIG1 hypoxia inducible domain family, member 1A [Source:HGNC Symbol;Acc:29527] T 29960 FTSJ2 FtsJ homolog 2 (E. coli) [Source:HGNC Symbol;Acc:16352] zzz999 54539 NDUFB11 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 11, 17.3kDa [Source:HGNC Symbol;Acc:20372] zzz999 57696 DDX55 DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Source:HGNC Symbol;Acc:20085] zzz999 9497 SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 [Source:HGNC Symbol;Acc:11033] P T 6184 RPN1 ribophorin I [Source:HGNC Symbol;Acc:10381] zzz999 142 PARP1 poly (ADP-ribose) polymerase 1 [Source:HGNC Symbol;Acc:270] zzz999 83464 APH1B anterior pharynx defective 1 homolog B (C. elegans) [Source:HGNC Symbol;Acc:24080] zzz999 55319 C4orf43 chromosome 4 open reading frame 43 [Source:HGNC Symbol;Acc:25638] zzz999 64282 PAPD5 PAP associated domain containing 5 [Source:HGNC Symbol;Acc:30758] P T 64710 NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 [Source:HGNC Symbol;Acc:29923] zzz999 112487 C14orf126 chromosome 14 open reading frame 126 [Source:HGNC Symbol;Acc:20277] T 7265 TTC1 tetratricopeptide repeat domain 1 [Source:HGNC Symbol;Acc:12391] zzz999 54878 DPP8 dipeptidyl-peptidase 8 [Source:HGNC Symbol;Acc:16490] P T 9039 UBA3 ubiquitin-like modifier activating enzyme 3 [Source:HGNC Symbol;Acc:12470] P T 282991 BLOC1S2 biogenesis of lysosomal organelles complex-1, subunit 2 [Source:HGNC Symbol;Acc:20984] zzz999 55164 SHQ1 SHQ1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:25543] zzz999 51193 ZNF639 zinc finger protein 639 [Source:HGNC Symbol;Acc:30950] zzz999 91039 DPP9 dipeptidyl-peptidase 9 [Source:HGNC Symbol;Acc:18648] zzz999 25972 UNC50 unc-50 homolog (C. elegans) [Source:HGNC Symbol;Acc:16046] zzz999 6500 SKP1 S-phase kinase-associated protein 1 [Source:HGNC Symbol;Acc:10899] P T 5033 P4HA1 prolyl 4-hydroxylase, alpha polypeptide I [Source:HGNC Symbol;Acc:8546] zzz999 11104 KATNA1 katanin p60 (ATPase containing) subunit A 1 [Source:HGNC Symbol;Acc:6216] zzz999 55006 TRMT61B tRNA methyltransferase 61 homolog B (S. cerevisiae) [Source:HGNC Symbol;Acc:26070] zzz999 3837 KPNB1 karyopherin (importin) beta 1 [Source:HGNC Symbol;Acc:6400] zzz999 57456 KIAA1143 KIAA1143 [Source:HGNC Symbol;Acc:29198] zzz999 4709 NDUFB3 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 3, 12kDa [Source:HGNC Symbol;Acc:7698] zzz999 7189 TRAF6 TNF receptor-associated factor 6 [Source:HGNC Symbol;Acc:12036] zzz999 5537 PPP6C protein phosphatase 6, catalytic subunit [Source:HGNC Symbol;Acc:9323] P T 128387 TATDN3 TatD DNase domain containing 3 [Source:HGNC Symbol;Acc:27010] T 51324 SPG21 spastic paraplegia 21 (autosomal recessive, Mast syndrome) [Source:HGNC Symbol;Acc:20373] zzz999 84262 PSMG3 proteasome (prosome, macropain) assembly chaperone 3 [Source:HGNC Symbol;Acc:22420] zzz999 55435 AP1AR adaptor-related protein complex 1 associated regulatory protein [Source:HGNC Symbol;Acc:28808] P T 81688 C6orf62 chromosome 6 open reading frame 62 [Source:HGNC Symbol;Acc:20998] P T 10226 PLIN3 perilipin 3 [Source:HGNC Symbol;Acc:16893] zzz999 8649 LAMTOR3 late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 [Source:HGNC Symbol;Acc:15606] T 10618 TGOLN2 trans-golgi network protein 2 [Source:HGNC Symbol;Acc:15450] T 3998 LMAN1 lectin, mannose-binding, 1 [Source:HGNC Symbol;Acc:6631] zzz999 8678 BECN1 beclin 1, autophagy related [Source:HGNC Symbol;Acc:1034] P T 6729 SRP54 signal recognition particle 54kDa [Source:HGNC Symbol;Acc:11301] zzz999 339448 C1orf174 chromosome 1 open reading frame 174 [Source:HGNC Symbol;Acc:27915] zzz999 8607 RUVBL1 RuvB-like 1 (E. coli) [Source:HGNC Symbol;Acc:10474] zzz999

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